Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Vsx2Q61412 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vsx2Q61412 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.73□□□□□ -0.37
Vsx2Q61412 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.73□□□□□ -0.37
Vsx2Q61412 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vsx2Q61412 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Gm6152-201ENSMUST00000151704 340 ntBASIC12.72□□□□□ -0.37
Vsx2Q61412 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.72□□□□□ -0.37
Vsx2Q61412 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.72□□□□□ -0.37
Vsx2Q61412 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.72□□□□□ -0.37
Vsx2Q61412 Itm2b-204ENSMUST00000228637 783 ntBASIC12.72□□□□□ -0.37
Vsx2Q61412 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx2Q61412 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Vsx2Q61412 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vsx2Q61412 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Vsx2Q61412 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vsx2Q61412 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.71□□□□□ -0.37
Vsx2Q61412 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm4984-201ENSMUST00000115987 360 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm13612-201ENSMUST00000119276 390 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.71□□□□□ -0.37
Vsx2Q61412 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm27486-201ENSMUST00000184923 80 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms