Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.25□□□□□ -0.13
Cln3Q61124 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cln3Q61124 Gm26361-201ENSMUST00000158868 186 ntBASIC14.25□□□□□ -0.13
Cln3Q61124 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.25□□□□□ -0.13
Cln3Q61124 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cln3Q61124 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Mir6927-201ENSMUST00000184494 71 ntBASIC14.25□□□□□ -0.13
Cln3Q61124 Gm45224-201ENSMUST00000208203 414 ntBASIC14.25□□□□□ -0.13
Cln3Q61124 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cln3Q61124 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.25□□□□□ -0.13
Cln3Q61124 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.25□□□□□ -0.13
Cln3Q61124 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cln3Q61124 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.25□□□□□ -0.13
Cln3Q61124 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.25□□□□□ -0.13
Cln3Q61124 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cln3Q61124 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cln3Q61124 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cln3Q61124 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.24□□□□□ -0.13
Cln3Q61124 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cln3Q61124 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Cln3Q61124 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.24□□□□□ -0.13
Cln3Q61124 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.24□□□□□ -0.13
Cln3Q61124 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cln3Q61124 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.24□□□□□ -0.13
Cln3Q61124 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.24□□□□□ -0.13
Cln3Q61124 Gm25732-201ENSMUST00000175168 60 ntBASIC14.24□□□□□ -0.13
Cln3Q61124 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.24□□□□□ -0.13
Cln3Q61124 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.24□□□□□ -0.13
Cln3Q61124 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.24□□□□□ -0.13
Cln3Q61124 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.24□□□□□ -0.13
Cln3Q61124 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.24□□□□□ -0.13
Cln3Q61124 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cln3Q61124 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.24□□□□□ -0.13
Cln3Q61124 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cln3Q61124 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cln3Q61124 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.23□□□□□ -0.13
Cln3Q61124 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cln3Q61124 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.23□□□□□ -0.13
Cln3Q61124 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cln3Q61124 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Gm12566-201ENSMUST00000121479 359 ntBASIC14.23□□□□□ -0.13
Cln3Q61124 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.23□□□□□ -0.13
Cln3Q61124 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.23□□□□□ -0.13
Cln3Q61124 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.23□□□□□ -0.13
Cln3Q61124 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.23□□□□□ -0.13
Cln3Q61124 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.23□□□□□ -0.13
Cln3Q61124 Mir339-201ENSMUST00000083659 96 ntBASIC14.23□□□□□ -0.13
Cln3Q61124 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cln3Q61124 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cln3Q61124 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cln3Q61124 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms