Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Urb1Q571H0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Urb1Q571H0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Urb1Q571H0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Urb1Q571H0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Urb1Q571H0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.02□□□□□ -0.49
Urb1Q571H0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Urb1Q571H0 Gm7593-201ENSMUST00000187246 644 ntBASIC12.02□□□□□ -0.49
Urb1Q571H0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.02□□□□□ -0.49
Urb1Q571H0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Urb1Q571H0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Urb1Q571H0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Urb1Q571H0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Urb1Q571H0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.01□□□□□ -0.49
Urb1Q571H0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.01□□□□□ -0.49
Urb1Q571H0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm23200-201ENSMUST00000104379 132 ntBASIC12.01□□□□□ -0.49
Urb1Q571H0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm13665-201ENSMUST00000120830 528 ntBASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm31256-201ENSMUST00000194705 506 ntBASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.01□□□□□ -0.49
Urb1Q571H0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.01□□□□□ -0.49
Urb1Q571H0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.01□□□□□ -0.49
Urb1Q571H0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Urb1Q571H0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Gm6447-201ENSMUST00000118905 835 ntBASIC12□□□□□ -0.49
Urb1Q571H0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Urb1Q571H0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Gm3096-201ENSMUST00000185770 364 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Gm37827-201ENSMUST00000194486 1542 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Gm9826-201ENSMUST00000029124 1299 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Gm12620-201ENSMUST00000119791 1986 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Gm12612-201ENSMUST00000140182 1986 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Snord83b-201ENSMUST00000104546 94 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12□□□□□ -0.49
Urb1Q571H0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12□□□□□ -0.49
Urb1Q571H0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12□□□□□ -0.49
Urb1Q571H0 Gm22121-201ENSMUST00000175148 54 ntBASIC12□□□□□ -0.49
Urb1Q571H0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Gm18584-201ENSMUST00000203098 964 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Gm8385-201ENSMUST00000058999 643 ntBASIC12□□□□□ -0.49
Urb1Q571H0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12□□□□□ -0.49
Urb1Q571H0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms