Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Gm14263-201ENSMUST00000117955 746 ntBASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Gm38317-201ENSMUST00000195564 343 ntBASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Gm13097-201ENSMUST00000210722 397 ntBASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx49Q4FZF3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Gm12566-201ENSMUST00000121479 359 ntBASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.19■□□□□ 0.02
Ddx49Q4FZF3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Gm12217-201ENSMUST00000118858 696 ntBASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Gm13570-201ENSMUST00000140763 309 ntBASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Gm42997-202ENSMUST00000200321 985 ntBASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Gm19208-201ENSMUST00000213861 912 ntBASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ddx49Q4FZF3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms