Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Gm37489-201ENSMUST00000191883 159 ntBASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Gm43758-201ENSMUST00000199500 367 ntBASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Gm8099-201ENSMUST00000200510 742 ntBASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Cts7-204ENSMUST00000225321 1257 ntBASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38aQ4FK66 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Gm4986-201ENSMUST00000119731 549 ntBASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Prpf38aQ4FK66 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.21■□□□□ 0.02
Prpf38aQ4FK66 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.21■□□□□ 0.02
Prpf38aQ4FK66 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.21■□□□□ 0.02
Prpf38aQ4FK66 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.21■□□□□ 0.02
Prpf38aQ4FK66 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Prpf38aQ4FK66 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Prpf38aQ4FK66 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf38aQ4FK66 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Gm13350-201ENSMUST00000120519 479 ntBASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.2■□□□□ 0.02
Prpf38aQ4FK66 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms