Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shank3Q4ACU6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shank3Q4ACU6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank3Q4ACU6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank3Q4ACU6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank3Q4ACU6 Gm23596-201ENSMUST00000104304 132 ntBASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Gm16166-201ENSMUST00000118291 787 ntBASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Gm22133-201ENSMUST00000102082 109 ntBASIC15.82■□□□□ 0.12
Shank3Q4ACU6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Gm10774-201ENSMUST00000188689 204 ntBASIC15.82■□□□□ 0.12
Shank3Q4ACU6 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Gm45550-201ENSMUST00000209380 946 ntBASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shank3Q4ACU6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Gm44980-201ENSMUST00000205826 314 ntBASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.81■□□□□ 0.12
Shank3Q4ACU6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shank3Q4ACU6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Gm22138-201ENSMUST00000158748 128 ntBASIC15.8■□□□□ 0.12
Shank3Q4ACU6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Gm8492-201ENSMUST00000182375 987 ntBASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Gm807-202ENSMUST00000224929 408 ntBASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.8■□□□□ 0.12
Shank3Q4ACU6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shank3Q4ACU6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms