Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Gm18187-201ENSMUST00000196476 984 ntBASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Gm43818-201ENSMUST00000200605 466 ntBASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Gm19163-201ENSMUST00000223313 780 ntBASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap2Q3V1H1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Gm13829-201ENSMUST00000119600 138 ntBASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Gm17208-201ENSMUST00000168388 535 ntBASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap2Q3V1H1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Gm1335-201ENSMUST00000121653 386 ntBASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Mir339-201ENSMUST00000083659 96 ntBASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Gm10268-201ENSMUST00000085340 555 ntBASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms