Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm6180-201ENSMUST00000065243 498 ntBASIC13.52□□□□□ -0.25
Trim80Q3V061 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim80Q3V061 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.52□□□□□ -0.25
Trim80Q3V061 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.52□□□□□ -0.25
Trim80Q3V061 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim80Q3V061 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim80Q3V061 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.51□□□□□ -0.25
Trim80Q3V061 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Gm44719-201ENSMUST00000206404 149 ntBASIC13.51□□□□□ -0.25
Trim80Q3V061 Dupd1-202ENSMUST00000224735 548 ntBASIC13.51□□□□□ -0.25
Trim80Q3V061 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim80Q3V061 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim80Q3V061 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim80Q3V061 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Gm45668-201ENSMUST00000211271 493 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim80Q3V061 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim80Q3V061 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim80Q3V061 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim80Q3V061 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.5□□□□□ -0.25
Trim80Q3V061 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 BC001981-202ENSMUST00000191393 1545 ntBASIC13.49□□□□□ -0.25
Trim80Q3V061 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms