Protein–RNA interactions for Protein: Q3UU96

Cdc42bpa, Serine/threonine-protein kinase MRCK alpha, mousemouse

Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42bpaQ3UU96 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Gm43045-201ENSMUST00000198725 2095 ntBASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Gm15595-201ENSMUST00000120840 961 ntBASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Cd63-ps-202ENSMUST00000154992 717 ntBASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 AC122876.1-201ENSMUST00000217619 825 ntBASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Ginm1-202ENSMUST00000065124 300 ntBASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.8■□□□□ 0.6
Cdc42bpaQ3UU96 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Gm28719-201ENSMUST00000187779 1757 ntBASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 CT571245.2-201ENSMUST00000218421 305 ntBASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 AC132901.1-201ENSMUST00000224345 508 ntBASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 AC154305.4-201ENSMUST00000224520 614 ntBASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdc42bpaQ3UU96 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Gm18304-201ENSMUST00000189162 546 ntBASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 AC093022.5-201ENSMUST00000226841 1079 ntBASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdc42bpaQ3UU96 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdc42bpaQ3UU96 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cdc42bpaQ3UU96 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.77■□□□□ 0.59
Cdc42bpaQ3UU96 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cdc42bpaQ3UU96 Gm23596-201ENSMUST00000104304 132 ntBASIC18.77■□□□□ 0.59
Cdc42bpaQ3UU96 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC18.77■□□□□ 0.59
Cdc42bpaQ3UU96 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC18.77■□□□□ 0.59
Cdc42bpaQ3UU96 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms