Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.34□□□□□ -0.92
Cks1brtQ3UNC9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.34□□□□□ -0.92
Cks1brtQ3UNC9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Cks1brtQ3UNC9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
Cks1brtQ3UNC9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Cks1brtQ3UNC9 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Cks1brtQ3UNC9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm13294-201ENSMUST00000121757 1330 ntBASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm4899-201ENSMUST00000178708 719 ntBASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm18027-201ENSMUST00000218947 619 ntBASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Otx2os1-206ENSMUST00000228153 787 ntBASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1brtQ3UNC9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cks1brtQ3UNC9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms