Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gm4984-201ENSMUST00000115987 360 ntBASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gm8805-201ENSMUST00000117848 313 ntBASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upf3bQ3ULL6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm13369-201ENSMUST00000119442 987 ntBASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm13123-201ENSMUST00000122173 492 ntBASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm37497-201ENSMUST00000195830 798 ntBASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upf3bQ3ULL6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Upf3bQ3ULL6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms