Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.37■□□□□ 0.05
Limch1Q3UH68 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Limch1Q3UH68 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.36■□□□□ 0.05
Limch1Q3UH68 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.36■□□□□ 0.05
Limch1Q3UH68 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.36■□□□□ 0.05
Limch1Q3UH68 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.36■□□□□ 0.05
Limch1Q3UH68 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.36■□□□□ 0.05
Limch1Q3UH68 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Limch1Q3UH68 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.35■□□□□ 0.05
Limch1Q3UH68 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.35■□□□□ 0.05
Limch1Q3UH68 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.35■□□□□ 0.05
Limch1Q3UH68 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Limch1Q3UH68 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.34■□□□□ 0.05
Limch1Q3UH68 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.34■□□□□ 0.05
Limch1Q3UH68 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Gm24644-201ENSMUST00000157114 139 ntBASIC15.34■□□□□ 0.05
Limch1Q3UH68 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.34■□□□□ 0.05
Limch1Q3UH68 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms