Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Brf2Q3UAW9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Brf2Q3UAW9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.31□□□□□ -0.44
Brf2Q3UAW9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Gm18018-201ENSMUST00000198273 408 ntBASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.3□□□□□ -0.44
Brf2Q3UAW9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.3□□□□□ -0.44
Brf2Q3UAW9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.3□□□□□ -0.44
Brf2Q3UAW9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Brf2Q3UAW9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.29□□□□□ -0.44
Brf2Q3UAW9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Gm12928-201ENSMUST00000117115 573 ntBASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Gm12091-201ENSMUST00000146791 830 ntBASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms