Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Mir7684-201ENSMUST00000183858 60 ntBASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Gm5425-201ENSMUST00000214125 459 ntBASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ptchd3Q0EEE2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Gm6912-201ENSMUST00000117218 544 ntBASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Gm15770-201ENSMUST00000117498 584 ntBASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Gm29667-201ENSMUST00000190817 490 ntBASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Gm20445-201ENSMUST00000061905 565 ntBASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ptchd3Q0EEE2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ptchd3Q0EEE2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ptchd3Q0EEE2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ptchd3Q0EEE2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Gm24420-201ENSMUST00000176676 59 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms