Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.65□□□□□ -0.38
Msx2Q03358 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Msx2Q03358 Gm15240-201ENSMUST00000118156 720 ntBASIC12.65□□□□□ -0.38
Msx2Q03358 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.65□□□□□ -0.38
Msx2Q03358 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.65□□□□□ -0.38
Msx2Q03358 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Msx2Q03358 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.65□□□□□ -0.38
Msx2Q03358 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.65□□□□□ -0.38
Msx2Q03358 Gm38294-201ENSMUST00000192831 381 ntBASIC12.65□□□□□ -0.38
Msx2Q03358 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Msx2Q03358 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Msx2Q03358 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.65□□□□□ -0.38
Msx2Q03358 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.65□□□□□ -0.38
Msx2Q03358 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.65□□□□□ -0.38
Msx2Q03358 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
Msx2Q03358 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx2Q03358 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.65□□□□□ -0.39
Msx2Q03358 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.64□□□□□ -0.39
Msx2Q03358 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.64□□□□□ -0.39
Msx2Q03358 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.64□□□□□ -0.39
Msx2Q03358 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm8000-201ENSMUST00000188378 592 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Gm10253-201ENSMUST00000194270 940 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Gm7774-201ENSMUST00000200064 533 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Gm43703-201ENSMUST00000200523 763 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.64□□□□□ -0.39
Msx2Q03358 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Msx2Q03358 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.64□□□□□ -0.39
Msx2Q03358 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.64□□□□□ -0.39
Msx2Q03358 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx2Q03358 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Msx2Q03358 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.63□□□□□ -0.39
Msx2Q03358 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Msx2Q03358 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms