Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a2Q02788 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a2Q02788 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a2Q02788 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a2Q02788 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a2Q02788 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a2Q02788 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a2Q02788 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a2Q02788 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.02□□□□□ -0.32
Col6a2Q02788 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a2Q02788 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.02□□□□□ -0.33
Col6a2Q02788 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.02□□□□□ -0.33
Col6a2Q02788 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.02□□□□□ -0.33
Col6a2Q02788 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.02□□□□□ -0.33
Col6a2Q02788 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm17208-201ENSMUST00000168388 535 ntBASIC13.02□□□□□ -0.33
Col6a2Q02788 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.02□□□□□ -0.33
Col6a2Q02788 Mir7221-201ENSMUST00000184009 72 ntBASIC13.02□□□□□ -0.33
Col6a2Q02788 Mir6420-201ENSMUST00000185032 102 ntBASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm6013-201ENSMUST00000212264 699 ntBASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.02□□□□□ -0.33
Col6a2Q02788 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col6a2Q02788 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col6a2Q02788 Olfr582-201ENSMUST00000098212 960 ntBASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col6a2Q02788 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col6a2Q02788 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.02□□□□□ -0.33
Col6a2Q02788 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a2Q02788 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.01□□□□□ -0.33
Col6a2Q02788 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm19309-201ENSMUST00000218295 205 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col6a2Q02788 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col6a2Q02788 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.01□□□□□ -0.33
Col6a2Q02788 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a2Q02788 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col6a2Q02788 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13□□□□□ -0.33
Col6a2Q02788 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13□□□□□ -0.33
Col6a2Q02788 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13□□□□□ -0.33
Col6a2Q02788 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms