Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.95□□□□□ -0.18
VcpQ01853 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.95□□□□□ -0.18
VcpQ01853 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.95□□□□□ -0.18
VcpQ01853 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.95□□□□□ -0.18
VcpQ01853 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.95□□□□□ -0.18
VcpQ01853 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.95□□□□□ -0.18
VcpQ01853 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.95□□□□□ -0.18
VcpQ01853 Gm18935-201ENSMUST00000212692 664 ntBASIC13.95□□□□□ -0.18
VcpQ01853 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VcpQ01853 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VcpQ01853 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcpQ01853 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.95□□□□□ -0.18
VcpQ01853 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.94□□□□□ -0.18
VcpQ01853 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.94□□□□□ -0.18
VcpQ01853 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.94□□□□□ -0.18
VcpQ01853 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.94□□□□□ -0.18
VcpQ01853 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Gm8810-201ENSMUST00000172895 754 ntBASIC13.94□□□□□ -0.18
VcpQ01853 Gm27331-201ENSMUST00000183705 60 ntBASIC13.94□□□□□ -0.18
VcpQ01853 Gm29608-201ENSMUST00000190444 463 ntBASIC13.94□□□□□ -0.18
VcpQ01853 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.94□□□□□ -0.18
VcpQ01853 Gm37259-201ENSMUST00000193903 849 ntBASIC13.94□□□□□ -0.18
VcpQ01853 Gm43138-201ENSMUST00000199123 708 ntBASIC13.94□□□□□ -0.18
VcpQ01853 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcpQ01853 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VcpQ01853 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VcpQ01853 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VcpQ01853 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VcpQ01853 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VcpQ01853 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VcpQ01853 Gm12997-201ENSMUST00000120207 640 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Gm22902-201ENSMUST00000158488 302 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VcpQ01853 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Gm45865-201ENSMUST00000211815 945 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Gm9368-201ENSMUST00000219348 831 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Gm8598-201ENSMUST00000221184 836 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Nsd1-205ENSMUST00000224693 852 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VcpQ01853 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.93□□□□□ -0.18
VcpQ01853 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.93□□□□□ -0.18
VcpQ01853 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.93□□□□□ -0.18
VcpQ01853 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcpQ01853 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.92□□□□□ -0.18
VcpQ01853 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
VcpQ01853 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms