Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
GabpaQ00422 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.76□□□□□ -0.05
GabpaQ00422 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.76□□□□□ -0.05
GabpaQ00422 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.76□□□□□ -0.05
GabpaQ00422 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.76□□□□□ -0.05
GabpaQ00422 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
GabpaQ00422 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.76□□□□□ -0.05
GabpaQ00422 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.76□□□□□ -0.05
GabpaQ00422 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.76□□□□□ -0.05
GabpaQ00422 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.76□□□□□ -0.05
GabpaQ00422 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.76□□□□□ -0.05
GabpaQ00422 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
GabpaQ00422 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
GabpaQ00422 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.76□□□□□ -0.05
GabpaQ00422 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GabpaQ00422 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GabpaQ00422 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
GabpaQ00422 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GabpaQ00422 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Gm12291-201ENSMUST00000121627 311 ntBASIC14.75□□□□□ -0.05
GabpaQ00422 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.75□□□□□ -0.05
GabpaQ00422 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
GabpaQ00422 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.75□□□□□ -0.05
GabpaQ00422 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
GabpaQ00422 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GabpaQ00422 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GabpaQ00422 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GabpaQ00422 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Gm14726-201ENSMUST00000120623 896 ntBASIC14.74□□□□□ -0.05
GabpaQ00422 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.74□□□□□ -0.05
GabpaQ00422 Gm25668-201ENSMUST00000157700 129 ntBASIC14.74□□□□□ -0.05
GabpaQ00422 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.74□□□□□ -0.05
GabpaQ00422 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.74□□□□□ -0.05
GabpaQ00422 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.74□□□□□ -0.05
GabpaQ00422 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms