Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PrkdcP97313 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm15566-201ENSMUST00000121130 590 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm43184-201ENSMUST00000197247 542 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 Gm45410-201ENSMUST00000211331 1093 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm8815-201ENSMUST00000173809 620 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC8.6□□□□□ -1.03
PrkdcP97313 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm9136-201ENSMUST00000193368 454 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm3017-201ENSMUST00000203603 1126 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC8.6□□□□□ -1.03
PrkdcP97313 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PrkdcP97313 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm18776-201ENSMUST00000188833 654 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 Gm4811-201ENSMUST00000220879 1220 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC8.6□□□□□ -1.03
PrkdcP97313 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Tmed9-203ENSMUST00000224741 1450 ntBASIC8.6□□□□□ -1.03
PrkdcP97313 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PrkdcP97313 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Gm11949-201ENSMUST00000117640 372 ntBASIC8.59□□□□□ -1.03
PrkdcP97313 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
PrkdcP97313 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC8.59□□□□□ -1.03
PrkdcP97313 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC8.59□□□□□ -1.03
PrkdcP97313 Gm15889-202ENSMUST00000212669 2443 ntBASIC8.59□□□□□ -1.03
PrkdcP97313 CT009489.1-201ENSMUST00000227740 1893 ntBASIC8.59□□□□□ -1.03
PrkdcP97313 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Gm22146-201ENSMUST00000157397 288 ntBASIC8.59□□□□□ -1.03
PrkdcP97313 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Gm45481-201ENSMUST00000209717 877 ntBASIC8.59□□□□□ -1.03
PrkdcP97313 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 AC159649.2-201ENSMUST00000222984 3223 ntBASIC8.59□□□□□ -1.03
PrkdcP97313 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC8.59□□□□□ -1.03
PrkdcP97313 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC8.59□□□□□ -1.03
PrkdcP97313 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PrkdcP97313 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms