Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SgcbP82349 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
SgcbP82349 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.66□□□□□ -0.54
SgcbP82349 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.66□□□□□ -0.54
SgcbP82349 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
SgcbP82349 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcbP82349 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SgcbP82349 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.66□□□□□ -0.54
SgcbP82349 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.65□□□□□ -0.54
SgcbP82349 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 Gm27331-201ENSMUST00000183705 60 ntBASIC11.65□□□□□ -0.54
SgcbP82349 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Gm19931-201ENSMUST00000198920 368 ntBASIC11.65□□□□□ -0.54
SgcbP82349 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.65□□□□□ -0.54
SgcbP82349 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.65□□□□□ -0.54
SgcbP82349 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SgcbP82349 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
SgcbP82349 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcbP82349 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
SgcbP82349 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SgcbP82349 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SgcbP82349 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
SgcbP82349 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SgcbP82349 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.64□□□□□ -0.55
SgcbP82349 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
SgcbP82349 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.64□□□□□ -0.55
SgcbP82349 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Gm8805-201ENSMUST00000117848 313 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
SgcbP82349 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Mir1982-201ENSMUST00000157368 74 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SgcbP82349 Mir7221-201ENSMUST00000184009 72 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Gm27731-201ENSMUST00000185192 107 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.64□□□□□ -0.55
SgcbP82349 Gm43438-201ENSMUST00000198133 379 ntBASIC11.64□□□□□ -0.55
SgcbP82349 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms