Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC20.9■□□□□ 0.94
Cux2P70298 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cux2P70298 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Mirlet7i-201ENSMUST00000083472 85 ntBASIC20.9■□□□□ 0.94
Cux2P70298 Gm28719-201ENSMUST00000187779 1757 ntBASIC20.9■□□□□ 0.94
Cux2P70298 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Cux2P70298 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Gm13142-201ENSMUST00000117213 1453 ntBASIC20.9■□□□□ 0.94
Cux2P70298 Gm5847-201ENSMUST00000178959 1595 ntBASIC20.9■□□□□ 0.94
Cux2P70298 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cux2P70298 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC20.89■□□□□ 0.94
Cux2P70298 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cux2P70298 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cux2P70298 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Cux2P70298 Gm16071-201ENSMUST00000119589 793 ntBASIC20.89■□□□□ 0.94
Cux2P70298 Gm4879-201ENSMUST00000122190 1272 ntBASIC20.89■□□□□ 0.94
Cux2P70298 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cux2P70298 Gm17826-201ENSMUST00000189720 798 ntBASIC20.89■□□□□ 0.94
Cux2P70298 Gm37299-201ENSMUST00000193951 826 ntBASIC20.89■□□□□ 0.94
Cux2P70298 Gm44329-201ENSMUST00000197469 112 ntBASIC20.89■□□□□ 0.94
Cux2P70298 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC20.89■□□□□ 0.94
Cux2P70298 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
Cux2P70298 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Cux2P70298 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Cux2P70298 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cux2P70298 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Gm43598-201ENSMUST00000202482 2479 ntBASIC20.89■□□□□ 0.93
Cux2P70298 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Gm13384-201ENSMUST00000117166 1344 ntBASIC20.89■□□□□ 0.93
Cux2P70298 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC20.89■□□□□ 0.93
Cux2P70298 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cux2P70298 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC20.88■□□□□ 0.93
Cux2P70298 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Gm27910-201ENSMUST00000185004 107 ntBASIC20.88■□□□□ 0.93
Cux2P70298 Gm4157-201ENSMUST00000211647 679 ntBASIC20.88■□□□□ 0.93
Cux2P70298 Gm10288-201ENSMUST00000084614 537 ntBASIC20.88■□□□□ 0.93
Cux2P70298 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cux2P70298 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux2P70298 AC154725.1-201ENSMUST00000224826 1961 ntBASIC20.88■□□□□ 0.93
Cux2P70298 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Gm24934-201ENSMUST00000103764 111 ntBASIC20.87■□□□□ 0.93
Cux2P70298 AC151275.1-201ENSMUST00000224870 585 ntBASIC20.87■□□□□ 0.93
Cux2P70298 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Cux2P70298 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Cux2P70298 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cux2P70298 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cux2P70298 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cux2P70298 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Cux2P70298 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Cux2P70298 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC20.87■□□□□ 0.93
Cux2P70298 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cux2P70298 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC20.87■□□□□ 0.93
Cux2P70298 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
Cux2P70298 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Gm8343-201ENSMUST00000182705 994 ntBASIC20.87■□□□□ 0.93
Cux2P70298 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC20.87■□□□□ 0.93
Cux2P70298 Gm9139-201ENSMUST00000218817 700 ntBASIC20.87■□□□□ 0.93
Cux2P70298 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 AC166341.2-201ENSMUST00000220571 120 ntBASIC20.87■□□□□ 0.93
Cux2P70298 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms