Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.86□□□□□ -0.51
Lsm3P62311 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.86□□□□□ -0.51
Lsm3P62311 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.86□□□□□ -0.51
Lsm3P62311 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.86□□□□□ -0.51
Lsm3P62311 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.85□□□□□ -0.51
Lsm3P62311 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lsm3P62311 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm3P62311 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.85□□□□□ -0.51
Lsm3P62311 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm3P62311 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.85□□□□□ -0.51
Lsm3P62311 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.85□□□□□ -0.51
Lsm3P62311 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm3P62311 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm3P62311 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm3P62311 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm3P62311 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Lsm3P62311 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm3P62311 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.84□□□□□ -0.51
Lsm3P62311 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.84□□□□□ -0.51
Lsm3P62311 Gm45453-201ENSMUST00000211758 853 ntBASIC11.84□□□□□ -0.51
Lsm3P62311 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm3P62311 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm3P62311 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm3P62311 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms