Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.33□□□□□ -0.44
Nup43P59235 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.33□□□□□ -0.44
Nup43P59235 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Nup43P59235 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nup43P59235 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.32□□□□□ -0.44
Nup43P59235 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.32□□□□□ -0.44
Nup43P59235 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nup43P59235 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nup43P59235 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.32□□□□□ -0.44
Nup43P59235 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup43P59235 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nup43P59235 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Gm15824-201ENSMUST00000119516 955 ntBASIC12.32□□□□□ -0.44
Nup43P59235 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.32□□□□□ -0.44
Nup43P59235 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup43P59235 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nup43P59235 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup43P59235 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup43P59235 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.32□□□□□ -0.44
Nup43P59235 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nup43P59235 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.32□□□□□ -0.44
Nup43P59235 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.32□□□□□ -0.44
Nup43P59235 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.32□□□□□ -0.44
Nup43P59235 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nup43P59235 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.32□□□□□ -0.44
Nup43P59235 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nup43P59235 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup43P59235 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nup43P59235 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.31□□□□□ -0.44
Nup43P59235 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.31□□□□□ -0.44
Nup43P59235 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nup43P59235 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.31□□□□□ -0.44
Nup43P59235 Gm2231-201ENSMUST00000125661 612 ntBASIC12.31□□□□□ -0.44
Nup43P59235 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.31□□□□□ -0.44
Nup43P59235 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Gm4271-201ENSMUST00000174444 973 ntBASIC12.31□□□□□ -0.44
Nup43P59235 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.31□□□□□ -0.44
Nup43P59235 Gm43433-201ENSMUST00000196573 481 ntBASIC12.31□□□□□ -0.44
Nup43P59235 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Gm6266-201ENSMUST00000203844 806 ntBASIC12.31□□□□□ -0.44
Nup43P59235 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup43P59235 Gm10146-201ENSMUST00000072739 309 ntBASIC12.31□□□□□ -0.44
Nup43P59235 Gm25007-201ENSMUST00000083808 133 ntBASIC12.31□□□□□ -0.44
Nup43P59235 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms