Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.56□□□□□ -0.08
Tpm1P58771 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Tpm1P58771 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Tpm1P58771 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.56□□□□□ -0.08
Tpm1P58771 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.56□□□□□ -0.08
Tpm1P58771 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tpm1P58771 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tpm1P58771 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.56□□□□□ -0.08
Tpm1P58771 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.56□□□□□ -0.08
Tpm1P58771 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tpm1P58771 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.56□□□□□ -0.08
Tpm1P58771 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tpm1P58771 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Tpm1P58771 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Tpm1P58771 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm1P58771 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.55□□□□□ -0.08
Tpm1P58771 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Mir449b-201ENSMUST00000104833 80 ntBASIC14.55□□□□□ -0.08
Tpm1P58771 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.55□□□□□ -0.08
Tpm1P58771 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Tpm1P58771 Gm19931-201ENSMUST00000198920 368 ntBASIC14.55□□□□□ -0.08
Tpm1P58771 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm1P58771 Gm17330-201ENSMUST00000221047 165 ntBASIC14.55□□□□□ -0.08
Tpm1P58771 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Tpm1P58771 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tpm1P58771 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Tpm1P58771 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.55□□□□□ -0.08
Tpm1P58771 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.55□□□□□ -0.08
Tpm1P58771 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.55□□□□□ -0.08
Tpm1P58771 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm1P58771 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tpm1P58771 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tpm1P58771 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tpm1P58771 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.54□□□□□ -0.08
Tpm1P58771 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.54□□□□□ -0.08
Tpm1P58771 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tpm1P58771 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.54□□□□□ -0.08
Tpm1P58771 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.54□□□□□ -0.08
Tpm1P58771 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.54□□□□□ -0.08
Tpm1P58771 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tpm1P58771 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.54□□□□□ -0.08
Tpm1P58771 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.54□□□□□ -0.08
Tpm1P58771 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.54□□□□□ -0.08
Tpm1P58771 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm1P58771 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tpm1P58771 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms