Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdh11P55288 Gm12341-201ENSMUST00000119724 503 ntBASIC11.91□□□□□ -0.5
Cdh11P55288 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cdh11P55288 Gm18187-201ENSMUST00000196476 984 ntBASIC11.91□□□□□ -0.5
Cdh11P55288 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdh11P55288 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.91□□□□□ -0.5
Cdh11P55288 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.91□□□□□ -0.5
Cdh11P55288 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdh11P55288 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.91□□□□□ -0.5
Cdh11P55288 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdh11P55288 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdh11P55288 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cdh11P55288 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdh11P55288 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cdh11P55288 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Gm18905-201ENSMUST00000205454 928 ntBASIC11.9□□□□□ -0.5
Cdh11P55288 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdh11P55288 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdh11P55288 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.9□□□□□ -0.5
Cdh11P55288 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cdh11P55288 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdh11P55288 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh11P55288 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh11P55288 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.9□□□□□ -0.51
Cdh11P55288 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh11P55288 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.9□□□□□ -0.51
Cdh11P55288 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Cdh11P55288 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh11P55288 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.89□□□□□ -0.51
Cdh11P55288 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh11P55288 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh11P55288 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms