Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.08□□□□□ -0.16
Nub1P54729 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nub1P54729 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Nub1P54729 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.08□□□□□ -0.16
Nub1P54729 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.08□□□□□ -0.16
Nub1P54729 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nub1P54729 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.07□□□□□ -0.16
Nub1P54729 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Mir874-201ENSMUST00000104769 76 ntBASIC14.07□□□□□ -0.16
Nub1P54729 Gm11814-201ENSMUST00000119515 929 ntBASIC14.07□□□□□ -0.16
Nub1P54729 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.07□□□□□ -0.16
Nub1P54729 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Gm24196-201ENSMUST00000179161 110 ntBASIC14.07□□□□□ -0.16
Nub1P54729 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Gm27839-201ENSMUST00000184242 106 ntBASIC14.07□□□□□ -0.16
Nub1P54729 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.07□□□□□ -0.16
Nub1P54729 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.07□□□□□ -0.16
Nub1P54729 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.07□□□□□ -0.16
Nub1P54729 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nub1P54729 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.07□□□□□ -0.16
Nub1P54729 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.07□□□□□ -0.16
Nub1P54729 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.07□□□□□ -0.16
Nub1P54729 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nub1P54729 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.06□□□□□ -0.16
Nub1P54729 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.06□□□□□ -0.16
Nub1P54729 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nub1P54729 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nub1P54729 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nub1P54729 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.06□□□□□ -0.16
Nub1P54729 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.06□□□□□ -0.16
Nub1P54729 Gm11978-201ENSMUST00000122315 466 ntBASIC14.06□□□□□ -0.16
Nub1P54729 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.06□□□□□ -0.16
Nub1P54729 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.06□□□□□ -0.16
Nub1P54729 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.06□□□□□ -0.16
Nub1P54729 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.06□□□□□ -0.16
Nub1P54729 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Nub1P54729 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.06□□□□□ -0.16
Nub1P54729 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Nub1P54729 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nub1P54729 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nub1P54729 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nub1P54729 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nub1P54729 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nub1P54729 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.05□□□□□ -0.16
Nub1P54729 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.05□□□□□ -0.16
Nub1P54729 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nub1P54729 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nub1P54729 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nub1P54729 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nub1P54729 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nub1P54729 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms