Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Gm27430-201ENSMUST00000184585 107 ntBASIC10.82□□□□□ -0.68
Nkx2-1P50220 Gm44333-201ENSMUST00000197168 107 ntBASIC10.82□□□□□ -0.68
Nkx2-1P50220 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.82□□□□□ -0.68
Nkx2-1P50220 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Paupar-201ENSMUST00000194826 3482 ntBASIC10.82□□□□□ -0.68
Nkx2-1P50220 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.81□□□□□ -0.68
Nkx2-1P50220 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm23935-201ENSMUST00000102303 57 ntBASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm24270-201ENSMUST00000102326 57 ntBASIC10.81□□□□□ -0.68
Nkx2-1P50220 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm24245-201ENSMUST00000157318 57 ntBASIC10.81□□□□□ -0.68
Nkx2-1P50220 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm25144-201ENSMUST00000179561 110 ntBASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm25352-201ENSMUST00000179815 110 ntBASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gm5425-201ENSMUST00000214125 459 ntBASIC10.81□□□□□ -0.68
Nkx2-1P50220 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-1P50220 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-1P50220 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms