Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Rfx3P48381 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.81□□□□□ -0.52
Rfx3P48381 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rfx3P48381 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.81□□□□□ -0.52
Rfx3P48381 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rfx3P48381 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.8□□□□□ -0.52
Rfx3P48381 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Rfx3P48381 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rfx3P48381 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Gm15678-201ENSMUST00000117573 960 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm12403-201ENSMUST00000121384 959 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Gm16215-201ENSMUST00000161990 637 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.8□□□□□ -0.52
Rfx3P48381 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.8□□□□□ -0.52
Rfx3P48381 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.8□□□□□ -0.52
Rfx3P48381 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Rfx3P48381 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.8□□□□□ -0.52
Rfx3P48381 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Rfx3P48381 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfx3P48381 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.79□□□□□ -0.52
Rfx3P48381 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rfx3P48381 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Rfx3P48381 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Gm22189-201ENSMUST00000103822 86 ntBASIC11.79□□□□□ -0.52
Rfx3P48381 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Rfx3P48381 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.79□□□□□ -0.52
Rfx3P48381 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.79□□□□□ -0.52
Rfx3P48381 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.79□□□□□ -0.52
Rfx3P48381 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Gm26464-201ENSMUST00000157094 305 ntBASIC11.79□□□□□ -0.52
Rfx3P48381 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Gm42612-201ENSMUST00000197986 623 ntBASIC11.79□□□□□ -0.52
Rfx3P48381 Gm43170-201ENSMUST00000199827 612 ntBASIC11.79□□□□□ -0.52
Rfx3P48381 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.79□□□□□ -0.52
Rfx3P48381 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Rfx3P48381 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Rfx3P48381 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfx3P48381 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rfx3P48381 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Rfx3P48381 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms