Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.69□□□□□ -0.22
Rfx2P48379 Mir6420-201ENSMUST00000185032 102 ntBASIC13.69□□□□□ -0.22
Rfx2P48379 Gm37497-201ENSMUST00000195830 798 ntBASIC13.69□□□□□ -0.22
Rfx2P48379 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.69□□□□□ -0.22
Rfx2P48379 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.69□□□□□ -0.22
Rfx2P48379 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.69□□□□□ -0.22
Rfx2P48379 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.69□□□□□ -0.22
Rfx2P48379 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.69□□□□□ -0.22
Rfx2P48379 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfx2P48379 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.68□□□□□ -0.22
Rfx2P48379 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rfx2P48379 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rfx2P48379 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfx2P48379 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.68□□□□□ -0.22
Rfx2P48379 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.68□□□□□ -0.22
Rfx2P48379 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.68□□□□□ -0.22
Rfx2P48379 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.68□□□□□ -0.22
Rfx2P48379 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.68□□□□□ -0.22
Rfx2P48379 Gm6013-201ENSMUST00000212264 699 ntBASIC13.68□□□□□ -0.22
Rfx2P48379 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfx2P48379 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rfx2P48379 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.68□□□□□ -0.22
Rfx2P48379 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rfx2P48379 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx2P48379 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rfx2P48379 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rfx2P48379 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.67□□□□□ -0.22
Rfx2P48379 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.67□□□□□ -0.22
Rfx2P48379 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Rfx2P48379 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.67□□□□□ -0.22
Rfx2P48379 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rfx2P48379 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.67□□□□□ -0.22
Rfx2P48379 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Gm27682-201ENSMUST00000183930 110 ntBASIC13.67□□□□□ -0.22
Rfx2P48379 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Gm10268-201ENSMUST00000085340 555 ntBASIC13.67□□□□□ -0.22
Rfx2P48379 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rfx2P48379 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rfx2P48379 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx2P48379 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.67□□□□□ -0.22
Rfx2P48379 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms