Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.32□□□□□ -0.6
TgfaP48030 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TgfaP48030 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TgfaP48030 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TgfaP48030 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.32□□□□□ -0.6
TgfaP48030 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TgfaP48030 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TgfaP48030 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TgfaP48030 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TgfaP48030 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.32□□□□□ -0.6
TgfaP48030 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TgfaP48030 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TgfaP48030 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TgfaP48030 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Gm11331-201ENSMUST00000119764 288 ntBASIC11.31□□□□□ -0.6
TgfaP48030 Gm13492-201ENSMUST00000119772 665 ntBASIC11.31□□□□□ -0.6
TgfaP48030 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Gm22121-201ENSMUST00000175148 54 ntBASIC11.31□□□□□ -0.6
TgfaP48030 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.31□□□□□ -0.6
TgfaP48030 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.31□□□□□ -0.6
TgfaP48030 Gm44262-201ENSMUST00000204969 372 ntBASIC11.31□□□□□ -0.6
TgfaP48030 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.31□□□□□ -0.6
TgfaP48030 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TgfaP48030 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.31□□□□□ -0.6
TgfaP48030 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TgfaP48030 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.31□□□□□ -0.6
TgfaP48030 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TgfaP48030 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.3□□□□□ -0.6
TgfaP48030 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
TgfaP48030 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Gm14208-201ENSMUST00000119645 678 ntBASIC11.3□□□□□ -0.6
TgfaP48030 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.3□□□□□ -0.6
TgfaP48030 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
TgfaP48030 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.3□□□□□ -0.6
TgfaP48030 Gm8099-201ENSMUST00000200510 742 ntBASIC11.3□□□□□ -0.6
TgfaP48030 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Gm29787-201ENSMUST00000222129 849 ntBASIC11.3□□□□□ -0.6
TgfaP48030 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.3□□□□□ -0.6
TgfaP48030 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms