Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.76□□□□□ -0.37
Gli1P47806 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.76□□□□□ -0.37
Gli1P47806 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.76□□□□□ -0.37
Gli1P47806 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Gli1P47806 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gli1P47806 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gli1P47806 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.75□□□□□ -0.37
Gli1P47806 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.75□□□□□ -0.37
Gli1P47806 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.75□□□□□ -0.37
Gli1P47806 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.75□□□□□ -0.37
Gli1P47806 Gm45841-201ENSMUST00000207700 164 ntBASIC12.75□□□□□ -0.37
Gli1P47806 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.75□□□□□ -0.37
Gli1P47806 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gli1P47806 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Gli1P47806 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gli1P47806 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.75□□□□□ -0.37
Gli1P47806 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.74□□□□□ -0.37
Gli1P47806 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.74□□□□□ -0.37
Gli1P47806 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gli1P47806 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.74□□□□□ -0.37
Gli1P47806 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.74□□□□□ -0.37
Gli1P47806 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gli1P47806 Mir874-201ENSMUST00000104769 76 ntBASIC12.74□□□□□ -0.37
Gli1P47806 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Mir1982-201ENSMUST00000157368 74 ntBASIC12.74□□□□□ -0.37
Gli1P47806 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.74□□□□□ -0.37
Gli1P47806 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gli1P47806 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gli1P47806 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.74□□□□□ -0.37
Gli1P47806 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.74□□□□□ -0.37
Gli1P47806 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gli1P47806 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gli1P47806 Gm5356-201ENSMUST00000093326 615 ntBASIC12.74□□□□□ -0.37
Gli1P47806 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gli1P47806 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms