Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.01□□□□□ -0.33
LdlrP35951 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LdlrP35951 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
LdlrP35951 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.01□□□□□ -0.33
LdlrP35951 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.01□□□□□ -0.33
LdlrP35951 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LdlrP35951 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LdlrP35951 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LdlrP35951 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LdlrP35951 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13□□□□□ -0.33
LdlrP35951 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LdlrP35951 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13□□□□□ -0.33
LdlrP35951 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Gm19931-201ENSMUST00000198920 368 ntBASIC13□□□□□ -0.33
LdlrP35951 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13□□□□□ -0.33
LdlrP35951 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13□□□□□ -0.33
LdlrP35951 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LdlrP35951 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LdlrP35951 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LdlrP35951 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13□□□□□ -0.33
LdlrP35951 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LdlrP35951 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13□□□□□ -0.33
LdlrP35951 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.99□□□□□ -0.33
LdlrP35951 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.99□□□□□ -0.33
LdlrP35951 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LdlrP35951 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LdlrP35951 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.99□□□□□ -0.33
LdlrP35951 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
LdlrP35951 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LdlrP35951 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.99□□□□□ -0.33
LdlrP35951 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.99□□□□□ -0.33
LdlrP35951 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LdlrP35951 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.99□□□□□ -0.33
LdlrP35951 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.99□□□□□ -0.33
LdlrP35951 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LdlrP35951 Gm5354-201ENSMUST00000182417 973 ntBASIC12.99□□□□□ -0.33
LdlrP35951 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.99□□□□□ -0.33
LdlrP35951 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.99□□□□□ -0.33
LdlrP35951 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.99□□□□□ -0.33
LdlrP35951 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.99□□□□□ -0.33
LdlrP35951 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.99□□□□□ -0.33
LdlrP35951 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.99□□□□□ -0.33
LdlrP35951 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LdlrP35951 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LdlrP35951 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms