Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm11978-201ENSMUST00000122315 466 ntBASIC14.24□□□□□ -0.13
Sox5P35710 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.24□□□□□ -0.13
Sox5P35710 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.24□□□□□ -0.13
Sox5P35710 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox5P35710 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sox5P35710 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sox5P35710 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sox5P35710 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sox5P35710 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Sox5P35710 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox5P35710 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.23□□□□□ -0.13
Sox5P35710 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sox5P35710 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.23□□□□□ -0.13
Sox5P35710 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sox5P35710 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.23□□□□□ -0.13
Sox5P35710 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sox5P35710 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.23□□□□□ -0.13
Sox5P35710 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.23□□□□□ -0.13
Sox5P35710 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.23□□□□□ -0.13
Sox5P35710 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox5P35710 Gm13689-201ENSMUST00000119360 685 ntBASIC14.23□□□□□ -0.13
Sox5P35710 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.23□□□□□ -0.13
Sox5P35710 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.23□□□□□ -0.13
Sox5P35710 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox5P35710 Mir7684-201ENSMUST00000183858 60 ntBASIC14.23□□□□□ -0.13
Sox5P35710 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.23□□□□□ -0.13
Sox5P35710 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox5P35710 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox5P35710 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.23□□□□□ -0.13
Sox5P35710 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox5P35710 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Sox5P35710 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox5P35710 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox5P35710 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Sox5P35710 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox5P35710 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox5P35710 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.22□□□□□ -0.13
Sox5P35710 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox5P35710 Gm38223-201ENSMUST00000194484 695 ntBASIC14.22□□□□□ -0.13
Sox5P35710 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms