Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Mir698-201ENSMUST00000102164 109 ntBASIC13.76□□□□□ -0.21
Rfc1P35601 Mir449b-201ENSMUST00000104833 80 ntBASIC13.76□□□□□ -0.21
Rfc1P35601 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rfc1P35601 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Rfc1P35601 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rfc1P35601 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.76□□□□□ -0.21
Rfc1P35601 Gm43575-201ENSMUST00000196420 516 ntBASIC13.76□□□□□ -0.21
Rfc1P35601 Gm7774-201ENSMUST00000200064 533 ntBASIC13.76□□□□□ -0.21
Rfc1P35601 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.76□□□□□ -0.21
Rfc1P35601 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.76□□□□□ -0.21
Rfc1P35601 Dupd1-202ENSMUST00000224735 548 ntBASIC13.76□□□□□ -0.21
Rfc1P35601 Gm8396-201ENSMUST00000057361 823 ntBASIC13.76□□□□□ -0.21
Rfc1P35601 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Rfc1P35601 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.76□□□□□ -0.21
Rfc1P35601 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfc1P35601 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rfc1P35601 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Rfc1P35601 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.75□□□□□ -0.21
Rfc1P35601 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.75□□□□□ -0.21
Rfc1P35601 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Gm15693-201ENSMUST00000120470 637 ntBASIC13.75□□□□□ -0.21
Rfc1P35601 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.75□□□□□ -0.21
Rfc1P35601 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
Rfc1P35601 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rfc1P35601 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rfc1P35601 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.75□□□□□ -0.21
Rfc1P35601 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rfc1P35601 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfc1P35601 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.75□□□□□ -0.21
Rfc1P35601 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.74□□□□□ -0.21
Rfc1P35601 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.74□□□□□ -0.21
Rfc1P35601 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rfc1P35601 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.74□□□□□ -0.21
Rfc1P35601 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Rfc1P35601 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfc1P35601 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Rfc1P35601 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.74□□□□□ -0.21
Rfc1P35601 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfc1P35601 Gm6916-202ENSMUST00000205523 195 ntBASIC13.74□□□□□ -0.21
Rfc1P35601 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.74□□□□□ -0.21
Rfc1P35601 Gm16476-201ENSMUST00000221544 139 ntBASIC13.74□□□□□ -0.21
Rfc1P35601 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms