Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hoxc5P32043 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.12□□□□□ -0.47
Hoxc5P32043 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.12□□□□□ -0.47
Hoxc5P32043 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.12□□□□□ -0.47
Hoxc5P32043 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc5P32043 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc5P32043 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc5P32043 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc5P32043 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc5P32043 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.11□□□□□ -0.47
Hoxc5P32043 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.11□□□□□ -0.47
Hoxc5P32043 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.11□□□□□ -0.47
Hoxc5P32043 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.11□□□□□ -0.47
Hoxc5P32043 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.11□□□□□ -0.47
Hoxc5P32043 Gm26315-201ENSMUST00000083890 321 ntBASIC12.11□□□□□ -0.47
Hoxc5P32043 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.11□□□□□ -0.47
Hoxc5P32043 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc5P32043 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.11□□□□□ -0.47
Hoxc5P32043 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.1□□□□□ -0.47
Hoxc5P32043 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.1□□□□□ -0.47
Hoxc5P32043 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm12341-201ENSMUST00000119724 503 ntBASIC12.1□□□□□ -0.47
Hoxc5P32043 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxc5P32043 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.1□□□□□ -0.47
Hoxc5P32043 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc5P32043 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms