Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.18□□□□□ -0.78
Ccl6P27784 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccl6P27784 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Ccl6P27784 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl6P27784 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.18□□□□□ -0.78
Ccl6P27784 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccl6P27784 Gm45841-201ENSMUST00000207700 164 ntBASIC10.18□□□□□ -0.78
Ccl6P27784 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccl6P27784 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Ccl6P27784 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl6P27784 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl6P27784 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl6P27784 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
Ccl6P27784 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Ccl6P27784 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccl6P27784 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.17□□□□□ -0.78
Ccl6P27784 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.17□□□□□ -0.78
Ccl6P27784 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Mir874-201ENSMUST00000104769 76 ntBASIC10.17□□□□□ -0.78
Ccl6P27784 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccl6P27784 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.17□□□□□ -0.78
Ccl6P27784 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Gm45668-201ENSMUST00000211271 493 ntBASIC10.17□□□□□ -0.78
Ccl6P27784 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl6P27784 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ccl6P27784 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl6P27784 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl6P27784 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl6P27784 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl6P27784 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccl6P27784 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Gm15371-201ENSMUST00000117057 784 ntBASIC10.16□□□□□ -0.78
Ccl6P27784 Gm6447-201ENSMUST00000118905 835 ntBASIC10.16□□□□□ -0.78
Ccl6P27784 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccl6P27784 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.16□□□□□ -0.78
Ccl6P27784 Gm6745-201ENSMUST00000199216 526 ntBASIC10.16□□□□□ -0.78
Ccl6P27784 Gm9908-201ENSMUST00000211534 448 ntBASIC10.16□□□□□ -0.78
Ccl6P27784 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl6P27784 Gm6983-201ENSMUST00000214912 628 ntBASIC10.16□□□□□ -0.78
Ccl6P27784 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccl6P27784 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms