Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.07□□□□□ -0.48
Cd40lgP27548 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.07□□□□□ -0.48
Cd40lgP27548 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.07□□□□□ -0.48
Cd40lgP27548 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gm8602-201ENSMUST00000184045 607 ntBASIC12.07□□□□□ -0.48
Cd40lgP27548 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.07□□□□□ -0.48
Cd40lgP27548 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gm16372-201ENSMUST00000073088 450 ntBASIC12.07□□□□□ -0.48
Cd40lgP27548 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd40lgP27548 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.06□□□□□ -0.48
Cd40lgP27548 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Cd40lgP27548 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.06□□□□□ -0.48
Cd40lgP27548 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.06□□□□□ -0.48
Cd40lgP27548 Gm26315-201ENSMUST00000083890 321 ntBASIC12.06□□□□□ -0.48
Cd40lgP27548 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40lgP27548 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd40lgP27548 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.05□□□□□ -0.48
Cd40lgP27548 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.05□□□□□ -0.48
Cd40lgP27548 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40lgP27548 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms