Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col8a2P25318 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.89□□□□□ -0.67
Col8a2P25318 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Gm7809-201ENSMUST00000153199 742 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Gm17208-201ENSMUST00000168388 535 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.89□□□□□ -0.67
Col8a2P25318 Gm38002-201ENSMUST00000193255 180 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Gm38158-201ENSMUST00000194617 339 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Gm45331-201ENSMUST00000209868 554 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Gm32025-201ENSMUST00000217960 307 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Gm19163-201ENSMUST00000223313 780 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.89□□□□□ -0.67
Col8a2P25318 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col8a2P25318 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col8a2P25318 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col8a2P25318 Olfr582-201ENSMUST00000098212 960 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.89□□□□□ -0.67
Col8a2P25318 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col8a2P25318 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col8a2P25318 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col8a2P25318 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.89□□□□□ -0.67
Col8a2P25318 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a2P25318 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col8a2P25318 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Snord83b-201ENSMUST00000104546 94 ntBASIC10.88□□□□□ -0.67
Col8a2P25318 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col8a2P25318 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Col8a2P25318 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.88□□□□□ -0.67
Col8a2P25318 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm26185-201ENSMUST00000157692 266 ntBASIC10.88□□□□□ -0.67
Col8a2P25318 Mir1938-201ENSMUST00000158746 100 ntBASIC10.88□□□□□ -0.67
Col8a2P25318 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.88□□□□□ -0.67
Col8a2P25318 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm26927-201ENSMUST00000182385 965 ntBASIC10.88□□□□□ -0.67
Col8a2P25318 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.88□□□□□ -0.67
Col8a2P25318 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.88□□□□□ -0.67
Col8a2P25318 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col8a2P25318 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col8a2P25318 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.88□□□□□ -0.67
Col8a2P25318 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.88□□□□□ -0.67
Col8a2P25318 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col8a2P25318 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.88□□□□□ -0.67
Col8a2P25318 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col8a2P25318 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a2P25318 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms