Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clk1P22518 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.24□□□□□ -0.45
Clk1P22518 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.24□□□□□ -0.45
Clk1P22518 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Clk1P22518 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gm12859-201ENSMUST00000117834 427 ntBASIC12.24□□□□□ -0.45
Clk1P22518 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clk1P22518 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.24□□□□□ -0.45
Clk1P22518 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.24□□□□□ -0.45
Clk1P22518 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.24□□□□□ -0.45
Clk1P22518 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.24□□□□□ -0.45
Clk1P22518 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clk1P22518 Gm38223-201ENSMUST00000194484 695 ntBASIC12.24□□□□□ -0.45
Clk1P22518 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.24□□□□□ -0.45
Clk1P22518 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.24□□□□□ -0.45
Clk1P22518 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.24□□□□□ -0.45
Clk1P22518 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.24□□□□□ -0.45
Clk1P22518 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.24□□□□□ -0.45
Clk1P22518 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clk1P22518 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.24□□□□□ -0.45
Clk1P22518 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.24□□□□□ -0.45
Clk1P22518 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clk1P22518 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clk1P22518 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.23□□□□□ -0.45
Clk1P22518 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.23□□□□□ -0.45
Clk1P22518 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clk1P22518 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.23□□□□□ -0.45
Clk1P22518 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Clk1P22518 Mir874-201ENSMUST00000104769 76 ntBASIC12.23□□□□□ -0.45
Clk1P22518 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.23□□□□□ -0.45
Clk1P22518 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.23□□□□□ -0.45
Clk1P22518 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.23□□□□□ -0.45
Clk1P22518 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Mir7654-201ENSMUST00000185082 70 ntBASIC12.23□□□□□ -0.45
Clk1P22518 Gm37917-201ENSMUST00000194711 392 ntBASIC12.23□□□□□ -0.45
Clk1P22518 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.23□□□□□ -0.45
Clk1P22518 Gm18307-201ENSMUST00000206864 949 ntBASIC12.23□□□□□ -0.45
Clk1P22518 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.23□□□□□ -0.45
Clk1P22518 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.23□□□□□ -0.45
Clk1P22518 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.23□□□□□ -0.45
Clk1P22518 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clk1P22518 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clk1P22518 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clk1P22518 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms