Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TP20293 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TP20293 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TP20293 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.3□□□□□ -0.44
TP20293 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.3□□□□□ -0.44
TP20293 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
TP20293 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.3□□□□□ -0.44
TP20293 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TP20293 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TP20293 Gm12928-201ENSMUST00000117115 573 ntBASIC12.3□□□□□ -0.44
TP20293 Gm5687-201ENSMUST00000118252 640 ntBASIC12.3□□□□□ -0.44
TP20293 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.3□□□□□ -0.44
TP20293 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.3□□□□□ -0.44
TP20293 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.3□□□□□ -0.44
TP20293 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TP20293 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.3□□□□□ -0.44
TP20293 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.3□□□□□ -0.44
TP20293 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.3□□□□□ -0.44
TP20293 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.3□□□□□ -0.44
TP20293 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
TP20293 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TP20293 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TP20293 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TP20293 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.29□□□□□ -0.44
TP20293 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TP20293 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TP20293 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.29□□□□□ -0.44
TP20293 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.29□□□□□ -0.44
TP20293 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.29□□□□□ -0.44
TP20293 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.29□□□□□ -0.44
TP20293 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.29□□□□□ -0.44
TP20293 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.29□□□□□ -0.44
TP20293 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.29□□□□□ -0.44
TP20293 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.29□□□□□ -0.44
TP20293 Gm18473-201ENSMUST00000220543 868 ntBASIC12.29□□□□□ -0.44
TP20293 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TP20293 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TP20293 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TP20293 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TP20293 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TP20293 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TP20293 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms