Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.23□□□□□ -0.45
Nid1P10493 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nid1P10493 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nid1P10493 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nid1P10493 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nid1P10493 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.22□□□□□ -0.45
Nid1P10493 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.22□□□□□ -0.45
Nid1P10493 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.22□□□□□ -0.45
Nid1P10493 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Gm12928-201ENSMUST00000117115 573 ntBASIC12.22□□□□□ -0.45
Nid1P10493 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Nid1P10493 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.22□□□□□ -0.45
Nid1P10493 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.22□□□□□ -0.45
Nid1P10493 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nid1P10493 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.22□□□□□ -0.45
Nid1P10493 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.22□□□□□ -0.45
Nid1P10493 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.22□□□□□ -0.45
Nid1P10493 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.22□□□□□ -0.45
Nid1P10493 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.22□□□□□ -0.45
Nid1P10493 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nid1P10493 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nid1P10493 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Nid1P10493 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.21□□□□□ -0.45
Nid1P10493 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.21□□□□□ -0.45
Nid1P10493 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Nid1P10493 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nid1P10493 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.21□□□□□ -0.45
Nid1P10493 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.21□□□□□ -0.45
Nid1P10493 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.21□□□□□ -0.45
Nid1P10493 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Nid1P10493 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.21□□□□□ -0.45
Nid1P10493 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.21□□□□□ -0.45
Nid1P10493 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.21□□□□□ -0.45
Nid1P10493 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Gm27701-201ENSMUST00000184498 110 ntBASIC12.21□□□□□ -0.45
Nid1P10493 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Gm44487-201ENSMUST00000205145 325 ntBASIC12.21□□□□□ -0.45
Nid1P10493 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.21□□□□□ -0.45
Nid1P10493 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nid1P10493 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nid1P10493 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.21□□□□□ -0.46
Nid1P10493 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nid1P10493 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nid1P10493 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.21□□□□□ -0.46
Nid1P10493 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nid1P10493 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nid1P10493 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nid1P10493 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.2□□□□□ -0.46
Nid1P10493 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.2□□□□□ -0.46
Nid1P10493 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nid1P10493 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nid1P10493 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nid1P10493 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms