Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chmp6P0C0A3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Gm27486-201ENSMUST00000184923 80 ntBASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Gm18473-201ENSMUST00000220543 868 ntBASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp6P0C0A3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.21□□□□□ -0.13
Chmp6P0C0A3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Gm4984-201ENSMUST00000115987 360 ntBASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp6P0C0A3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp6P0C0A3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp6P0C0A3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Chmp6P0C0A3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp6P0C0A3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms