Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC19.34■□□□□ 0.69
NclP09405 Gm7783-201ENSMUST00000204795 781 ntBASIC19.34■□□□□ 0.69
NclP09405 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NclP09405 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NclP09405 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC19.34■□□□□ 0.69
NclP09405 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NclP09405 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 AC154725.1-201ENSMUST00000224826 1961 ntBASIC19.33■□□□□ 0.69
NclP09405 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC19.33■□□□□ 0.69
NclP09405 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NclP09405 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC19.33■□□□□ 0.68
NclP09405 Mospd4-201ENSMUST00000180618 576 ntBASIC19.33■□□□□ 0.68
NclP09405 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NclP09405 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NclP09405 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC19.33■□□□□ 0.68
NclP09405 Gm8227-201ENSMUST00000223306 571 ntBASIC19.33■□□□□ 0.68
NclP09405 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NclP09405 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
NclP09405 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NclP09405 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NclP09405 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NclP09405 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NclP09405 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC19.32■□□□□ 0.68
NclP09405 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NclP09405 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC19.32■□□□□ 0.68
NclP09405 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC19.32■□□□□ 0.68
NclP09405 Gm24548-201ENSMUST00000158650 108 ntBASIC19.32■□□□□ 0.68
NclP09405 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC19.32■□□□□ 0.68
NclP09405 Cts7-204ENSMUST00000225321 1257 ntBASIC19.32■□□□□ 0.68
NclP09405 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
NclP09405 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC19.32■□□□□ 0.68
NclP09405 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NclP09405 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NclP09405 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NclP09405 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC19.31■□□□□ 0.68
NclP09405 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NclP09405 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Gm15370-201ENSMUST00000117158 253 ntBASIC19.31■□□□□ 0.68
NclP09405 Gm13297-201ENSMUST00000120205 934 ntBASIC19.31■□□□□ 0.68
NclP09405 Gm13350-201ENSMUST00000120519 479 ntBASIC19.31■□□□□ 0.68
NclP09405 Gm5637-201ENSMUST00000153890 1119 ntBASIC19.31■□□□□ 0.68
NclP09405 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC19.31■□□□□ 0.68
NclP09405 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Gm37489-201ENSMUST00000191883 159 ntBASIC19.31■□□□□ 0.68
NclP09405 Gm43758-201ENSMUST00000199500 367 ntBASIC19.31■□□□□ 0.68
NclP09405 Gm45865-201ENSMUST00000211815 945 ntBASIC19.31■□□□□ 0.68
NclP09405 Gm7046-201ENSMUST00000221351 977 ntBASIC19.31■□□□□ 0.68
NclP09405 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NclP09405 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NclP09405 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NclP09405 Gm5466-201ENSMUST00000119395 1890 ntBASIC19.31■□□□□ 0.68
NclP09405 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms