Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.46□□□□□ -0.57
P04224 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P04224 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
P04224 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P04224 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P04224 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P04224 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
P04224 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P04224 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
P04224 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
P04224 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P04224 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P04224 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
P04224 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
P04224 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
P04224 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.45□□□□□ -0.58
P04224 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.45□□□□□ -0.58
P04224 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
P04224 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.45□□□□□ -0.58
P04224 Gm13365-201ENSMUST00000121188 973 ntBASIC11.45□□□□□ -0.58
P04224 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.45□□□□□ -0.58
P04224 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.45□□□□□ -0.58
P04224 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.45□□□□□ -0.58
P04224 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.45□□□□□ -0.58
P04224 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P04224 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.45□□□□□ -0.58
P04224 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.45□□□□□ -0.58
P04224 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
P04224 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P04224 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.45□□□□□ -0.58
P04224 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
P04224 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.44□□□□□ -0.58
P04224 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.44□□□□□ -0.58
P04224 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.44□□□□□ -0.58
P04224 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
P04224 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.44□□□□□ -0.58
P04224 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04224 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
P04224 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
P04224 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.44□□□□□ -0.58
P04224 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.44□□□□□ -0.58
P04224 Gm43125-201ENSMUST00000201724 730 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms