Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.21□□□□□ -0.45
IghmP01872 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.21□□□□□ -0.45
IghmP01872 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IghmP01872 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
IghmP01872 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IghmP01872 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IghmP01872 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
IghmP01872 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.21□□□□□ -0.45
IghmP01872 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
IghmP01872 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
IghmP01872 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
IghmP01872 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.21□□□□□ -0.46
IghmP01872 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.21□□□□□ -0.46
IghmP01872 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
IghmP01872 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.21□□□□□ -0.46
IghmP01872 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
IghmP01872 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.2□□□□□ -0.46
IghmP01872 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
IghmP01872 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.2□□□□□ -0.46
IghmP01872 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.2□□□□□ -0.46
IghmP01872 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Gm27437-201ENSMUST00000183429 107 ntBASIC12.2□□□□□ -0.46
IghmP01872 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
IghmP01872 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
IghmP01872 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.2□□□□□ -0.46
IghmP01872 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IghmP01872 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.19□□□□□ -0.46
IghmP01872 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.19□□□□□ -0.46
IghmP01872 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.19□□□□□ -0.46
IghmP01872 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
IghmP01872 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
IghmP01872 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
IghmP01872 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.19□□□□□ -0.46
IghmP01872 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.19□□□□□ -0.46
IghmP01872 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.19□□□□□ -0.46
IghmP01872 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.19□□□□□ -0.46
IghmP01872 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.19□□□□□ -0.46
IghmP01872 Gm6458-201ENSMUST00000211573 635 ntBASIC12.19□□□□□ -0.46
IghmP01872 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.19□□□□□ -0.46
IghmP01872 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IghmP01872 Gm15823-201ENSMUST00000064305 670 ntBASIC12.19□□□□□ -0.46
IghmP01872 Gm2423-201ENSMUST00000074863 733 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms