Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.95□□□□□ -0.5
P01852 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.95□□□□□ -0.5
P01852 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P01852 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Mir874-201ENSMUST00000104769 76 ntBASIC11.95□□□□□ -0.5
P01852 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Gm12390-201ENSMUST00000117897 397 ntBASIC11.95□□□□□ -0.5
P01852 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.95□□□□□ -0.5
P01852 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.95□□□□□ -0.5
P01852 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.95□□□□□ -0.5
P01852 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.95□□□□□ -0.5
P01852 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.95□□□□□ -0.5
P01852 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
P01852 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.95□□□□□ -0.5
P01852 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
P01852 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.95□□□□□ -0.5
P01852 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P01852 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01852 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.94□□□□□ -0.5
P01852 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.94□□□□□ -0.5
P01852 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
P01852 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
P01852 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
P01852 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.94□□□□□ -0.5
P01852 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.94□□□□□ -0.5
P01852 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
P01852 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P01852 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.94□□□□□ -0.5
P01852 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Gm11618-201ENSMUST00000117946 267 ntBASIC11.94□□□□□ -0.5
P01852 Gm22331-201ENSMUST00000158066 136 ntBASIC11.94□□□□□ -0.5
P01852 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P01852 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.94□□□□□ -0.5
P01852 Gm44069-201ENSMUST00000204898 506 ntBASIC11.94□□□□□ -0.5
P01852 Gm45841-201ENSMUST00000207700 164 ntBASIC11.94□□□□□ -0.5
P01852 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.94□□□□□ -0.5
P01852 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.94□□□□□ -0.5
P01852 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.94□□□□□ -0.5
P01852 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.94□□□□□ -0.5
P01852 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.94□□□□□ -0.5
P01852 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.94□□□□□ -0.5
P01852 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.94□□□□□ -0.5
P01852 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.94□□□□□ -0.5
P01852 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01852 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
P01852 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms