Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.28□□□□□ -0.6
Igh-VJ558P01758 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igh-VJ558P01758 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igh-VJ558P01758 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igh-VJ558P01758 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igh-VJ558P01758 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igh-VJ558P01758 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.27□□□□□ -0.6
Igh-VJ558P01758 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Igh-VJ558P01758 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igh-VJ558P01758 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Igh-VJ558P01758 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igh-VJ558P01758 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm11803-201ENSMUST00000119966 444 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm12291-201ENSMUST00000121627 311 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm12138-201ENSMUST00000122180 951 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm10012-201ENSMUST00000078252 192 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igh-VJ558P01758 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Gm13813-201ENSMUST00000120998 787 ntBASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Gm6244-201ENSMUST00000178732 841 ntBASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igh-VJ558P01758 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms