Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vti1aO89116 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.08□□□□□ -0.16
Vti1aO89116 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.08□□□□□ -0.16
Vti1aO89116 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.08□□□□□ -0.16
Vti1aO89116 Gm7584-201ENSMUST00000175829 940 ntBASIC14.08□□□□□ -0.16
Vti1aO89116 Gm26927-201ENSMUST00000182385 965 ntBASIC14.08□□□□□ -0.16
Vti1aO89116 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.08□□□□□ -0.16
Vti1aO89116 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.08□□□□□ -0.16
Vti1aO89116 Gm9368-201ENSMUST00000219348 831 ntBASIC14.08□□□□□ -0.16
Vti1aO89116 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.08□□□□□ -0.16
Vti1aO89116 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.08□□□□□ -0.16
Vti1aO89116 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vti1aO89116 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1aO89116 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Gm14350-201ENSMUST00000116642 640 ntBASIC14.07□□□□□ -0.16
Vti1aO89116 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Gm43133-201ENSMUST00000197472 463 ntBASIC14.07□□□□□ -0.16
Vti1aO89116 Gm7783-201ENSMUST00000204795 781 ntBASIC14.07□□□□□ -0.16
Vti1aO89116 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vti1aO89116 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Vti1aO89116 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Vti1aO89116 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vti1aO89116 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
Vti1aO89116 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vti1aO89116 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1aO89116 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vti1aO89116 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.06□□□□□ -0.16
Vti1aO89116 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vti1aO89116 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Vti1aO89116 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Gm16202-201ENSMUST00000117532 544 ntBASIC14.06□□□□□ -0.16
Vti1aO89116 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.06□□□□□ -0.16
Vti1aO89116 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.06□□□□□ -0.16
Vti1aO89116 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.06□□□□□ -0.16
Vti1aO89116 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Vti1aO89116 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.06□□□□□ -0.16
Vti1aO89116 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.06□□□□□ -0.16
Vti1aO89116 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.06□□□□□ -0.16
Vti1aO89116 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.06□□□□□ -0.16
Vti1aO89116 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.06□□□□□ -0.16
Vti1aO89116 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vti1aO89116 Gm24526-201ENSMUST00000082921 158 ntBASIC14.06□□□□□ -0.16
Vti1aO89116 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.06□□□□□ -0.16
Vti1aO89116 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1aO89116 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms