Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.06□□□□□ -0.48
Cops4O88544 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.06□□□□□ -0.48
Cops4O88544 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Cops4O88544 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cops4O88544 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.05□□□□□ -0.48
Cops4O88544 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cops4O88544 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cops4O88544 Gm13385-201ENSMUST00000121089 220 ntBASIC12.05□□□□□ -0.48
Cops4O88544 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.05□□□□□ -0.48
Cops4O88544 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.05□□□□□ -0.48
Cops4O88544 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.05□□□□□ -0.48
Cops4O88544 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cops4O88544 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.05□□□□□ -0.48
Cops4O88544 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.05□□□□□ -0.48
Cops4O88544 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.05□□□□□ -0.48
Cops4O88544 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.05□□□□□ -0.48
Cops4O88544 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cops4O88544 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cops4O88544 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.04□□□□□ -0.48
Cops4O88544 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.04□□□□□ -0.48
Cops4O88544 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cops4O88544 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.04□□□□□ -0.48
Cops4O88544 Gm44344-201ENSMUST00000200287 129 ntBASIC12.04□□□□□ -0.48
Cops4O88544 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.04□□□□□ -0.48
Cops4O88544 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.04□□□□□ -0.48
Cops4O88544 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.04□□□□□ -0.48
Cops4O88544 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cops4O88544 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops4O88544 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cops4O88544 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops4O88544 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.03□□□□□ -0.48
Cops4O88544 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms