Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Gm16177-201ENSMUST00000120728 718 ntBASIC12.91□□□□□ -0.34
Pdlim1O70400 Gm16479-201ENSMUST00000121706 932 ntBASIC12.91□□□□□ -0.34
Pdlim1O70400 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.91□□□□□ -0.34
Pdlim1O70400 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdlim1O70400 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdlim1O70400 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.91□□□□□ -0.34
Pdlim1O70400 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pdlim1O70400 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdlim1O70400 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.9□□□□□ -0.34
Pdlim1O70400 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.9□□□□□ -0.34
Pdlim1O70400 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Gm26185-201ENSMUST00000157692 266 ntBASIC12.9□□□□□ -0.34
Pdlim1O70400 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.9□□□□□ -0.34
Pdlim1O70400 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.9□□□□□ -0.34
Pdlim1O70400 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.9□□□□□ -0.34
Pdlim1O70400 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdlim1O70400 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdlim1O70400 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pdlim1O70400 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pdlim1O70400 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Pdlim1O70400 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.89□□□□□ -0.35
Pdlim1O70400 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm12384-201ENSMUST00000119228 919 ntBASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm4768-201ENSMUST00000206199 686 ntBASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.89□□□□□ -0.35
Pdlim1O70400 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pdlim1O70400 Gm5186-201ENSMUST00000218781 920 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms